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Compiled by: Julian Thorpe

 

Preparation of Samples for TEM

N.B. Project Planning: There are some general points you should consider carefully before investing a lot of time and effort in an EM experiment (or expecting me to invest.....!):
Have you chosen the right specimen/part of specimen for your experimental hypothesis? If there is a choice then use one which is easily-available, easy to prepare, etc.
The age of the specimen, elapsed time after treatment (or time-course points) need to be considered.
Do you need to prepare control specimens (i.e. apart from any controls you may have to carry out subsequent to preparation, such as for immunogold labelling)? For example, healthy (untreated) specimens to compare with treated.
Especially if you are going to carry out any quantitative work (morphometry [assessment of amounts of particular organelles] or immunogold localisations) how many different tissue pieces from how many different individual animals/plants do you need for your results to be significant? Bear in mind that replication at the level of the individual plant or animal is critical (examination of many different areas from one individual specimen is not acceptable).
And finally: 

Question: Are you interested purely in examining the ultrastructure of your sample or do you wish to localise any specific tissue proteins by immunogold labelling (if you have the relevant antibody!)?

Answer:
I am interested purely in the ultrastructural appearance of my specimen.
I want to examine a particulate sample.
I need to be able to localise a specific protein(s) subsequently by immunogold labelling.